PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027151110.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 382aa    MW: 42392.1 Da    PI: 4.3652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027151110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18123171254
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     + kGVr++k +g+W+AeIrd +     + kr++lg++ ++eeA +a++a r+++e
  XP_027151110.1 123 KRKGVRQRK-WGKWAAEIRDpF-----KgKRIWLGTYNSPEEASRAYEAKRLEFE 171
                     78******9.**********55.....45***********************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MPEPRRQVIL NQEHHNKRPK IMAEPTRPVR KIRVFCDDPD ATDTDSSDDE RVIEKKPKRF  60
LREIILPIVE LKSQPGQPVA VALAPEAENS CQESNNGEKN NPKKKKGLAK PLSQPQSKPS  120
STKRKGVRQR KWGKWAAEIR DPFKGKRIWL GTYNSPEEAS RAYEAKRLEF EARAMADQNA  180
SEKCSNVNDD NNNNNQSSST AVSQPHNQNE APACVSEDSA ESLVSHTSPA SVLELDCLTS  240
SATPAMASVD GEKQDEEEKV KNVAEGTKVV EQKVPDLDLM MDDELSLVEL AQGMELDFEL  300
NSLFMGEEEF GQPLGDFVIG DIEDIPICGF EDDQPSALPD FDFDFDFDAC NEAFSWMDDG  360
PALMNGASPL ENQHSVPISF AA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-21ERF family protein