PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150634.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 380aa MW: 43406.4 Da PI: 6.4694

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	308	342	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_027150634.1 308 KWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 342 669*****************************885 PP
2	ELK	37.8	4e-13	262	283	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKYsgyL+sLkqE+s XP_027150634.1 262 ELKNHLLRKYSGYLSSLKQELS 283 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MEEYNHHLGE NTGPRGSFLY GGPVLAAPSS SVYARASSGS NNQLPISSFH LQSSAECYQQ 60 SEGQDHPIVK TEAGASSHHQ HGQHKFQYPS IIRSHQTVQD HHQQPHHQES EISGEAEAIK 120 AKIIAHPQYS NLLEAYMDCQ KVGAPPEVVA RLTAARQEFE ARQRASLVTG RDVNKDPELD 180 QFMEAYYDML VKYREELTRP LQEAMEFMRR VETQLNMLGN GPVRIFNSDE KCEGVGSSEE 240 DQDNSGGETE LPEIDPRAED RELKNHLLRK YSGYLSSLKQ ELSKKKKKGK LPKDARQKLL 300 SWWELHYKWP YPSETEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FMVMDGLHAQ 360 NTALYMEGHY MGEGPYRLGP

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MEEYNHHLGE NTGPRGSFLY GGPVLAAPSS SVYARASSGS NNQLPISSFH LQSSAECYQQ  60
SEGQDHPIVK TEAGASSHHQ HGQHKFQYPS IIRSHQTVQD HHQQPHHQES EISGEAEAIK  120
AKIIAHPQYS NLLEAYMDCQ KVGAPPEVVA RLTAARQEFE ARQRASLVTG RDVNKDPELD  180
QFMEAYYDML VKYREELTRP LQEAMEFMRR VETQLNMLGN GPVRIFNSDE KCEGVGSSEE  240
DQDNSGGETE LPEIDPRAED RELKNHLLRK YSGYLSSLKQ ELSKKKKKGK LPKDARQKLL  300
SWWELHYKWP YPSETEKVAL AESTGLDQKQ INNWFINQRK RHWKPSEDMQ FMVMDGLHAQ  360
NTALYMEGHY MGEGPYRLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-127	TALE family protein