PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027150627.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

SRS

Protein Properties

Length: 363aa MW: 38797.5 Da PI: 8.1775

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027150627.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	219.7	6.1e-68	122	281	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa........aeaaskrkrel...kskkqsals 87 t++CqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerqq a +++++++++ + +++kr re+ +s+l+ XP_027150627.1 122 ATMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQVSALQTQQQQQQQnqqqlsliRGDNPKRLRENpggGGGGSSSLA 216 689********************************************9988877766666555778888888888888888766667788899 PP DUF702 88 stklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +t+l++++s l++ ++P+ev+ +a frcvrvs++dd+ee++aYqtav+igGhvfkGiLydqGle+ XP_027150627.1 217 CTRLPTSTS--GLDVGNFPAEVNYPASFRCVRVSAMDDAEEQYAYQTAVNIGGHVFKGILYDQGLES 281 999988865..59999**********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MSGFFSLGGG KEQEQQEQQD TTNNSSFYLF KNEEIYNKGF ELWQQYYQLH QQRIHHHHHH 60 QVVGQDVDFS VGPSRRIISS GSGGSGSIGD DSSYRSAGFR VMRHGGGGGT GSGSSSGGGG 120 GATMNCQDCG NQAKKDCPHM RCRTCCKSRG FQCQTHVKST WVPAAKRRER QQVSALQTQQ 180 QQQQQNQQQL SLIRGDNPKR LRENPGGGGG GSSSLACTRL PTSTSGLDVG NFPAEVNYPA 240 SFRCVRVSAM DDAEEQYAYQ TAVNIGGHVF KGILYDQGLE SRYATSGRAG AGEASSGGGG 300 GHGHHHDHDP QPPLNLIGTA AAATANAAVT STNPALTMLD PSIYPTPLSA FMAGTQFFPP 360 PRS

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MSGFFSLGGG KEQEQQEQQD TTNNSSFYLF KNEEIYNKGF ELWQQYYQLH QQRIHHHHHH  60
QVVGQDVDFS VGPSRRIISS GSGGSGSIGD DSSYRSAGFR VMRHGGGGGT GSGSSSGGGG  120
GATMNCQDCG NQAKKDCPHM RCRTCCKSRG FQCQTHVKST WVPAAKRRER QQVSALQTQQ  180
QQQQQNQQQL SLIRGDNPKR LRENPGGGGG GSSSLACTRL PTSTSGLDVG NFPAEVNYPA  240
SFRCVRVSAM DDAEEQYAYQ TAVNIGGHVF KGILYDQGLE SRYATSGRAG AGEASSGGGG  300
GHGHHHDHDP QPPLNLIGTA AAATANAAVT STNPALTMLD PSIYPTPLSA FMAGTQFFPP  360
PRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	1e-64	SRS family protein