PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 299aa MW: 33343.9 Da PI: 7.9702 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +g+WvAeI+ + ++ r +lg+f+taeeAa+a+++a+ l+g XP_027150354.1 24 KFVGVRQRP-SGKWVAEIKNTT---QKIRMWLGTFDTAEEAAQAYDEAACLLRG 73 799******.7******99932...36**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MELQFQKQST YMVDRNRGSS SKRKFVGVRQ RPSGKWVAEI KNTTQKIRMW LGTFDTAEEA 60 AQAYDEAACL LRGSNTRTNF MNHVPCNPAL SLKIRNLLNQ KKGRLNKIAS LASTASNKTA 120 TESSSRTISR TSSSSSTSQS SASGSSFSSS SSNNNDNSAA VLTTIQAQTK LFDDAYKPDL 180 SYFMAAGGYQ PASSSDQFDY TTGRDGSLIS TFASDFDRIL LGQQDAGFEL PKKDTSEMMS 240 DHQTQYHHQI PDFEHMKVQR QISASLYAMN GVSEYWENVH DCNDSFWDLP MLYQMFCPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 6e-34 | ERF family protein |