PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 195aa MW: 21371.7 Da PI: 4.393 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.3e-18 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr ++ +g+Wv+eIr+p gk++r++lg+f+t+e+Aa a++aa+ ++g XP_027150181.1 18 SVYRGVRKRR-WGKWVSEIREP---GKKTRIWLGSFDTEEMAAVAHDAAAYFFRG 68 78*****887.**********8...557**********************99997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MENNNNNINN NGGTGSPSVY RGVRKRRWGK WVSEIREPGK KTRIWLGSFD TEEMAAVAHD 60 AAAYFFRGSA AQLNFPVLVG NLPRPASSSA EDIRMAAQEA SLLVKNLSGD QHNGGHQAAS 120 GSSSNMANPI DTQPLTVGLS PVQIQAINDL PLESPDYKRW MEMASGSEVL EEPMIFPDDY 180 DMADYEEIPD DSLWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 1e-47 | ERF family protein |