PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150178.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 277aa    MW: 31397.9 Da    PI: 6.3142
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2491.5e-151462355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y G+r++k +g+Wv+eIr+p   gk+ r++lg++  +e Aa+a++ a++ l+g
  XP_027150178.1 14 YIGIRQRK-WGKWVSEIREP---GKKSRIWLGSYEAPELAAAAYDVAALHLKG 62
                    89*****9.**********8...557**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAQEIRNEYA RQSYIGIRQR KWGKWVSEIR EPGKKSRIWL GSYEAPELAA AAYDVAALHL  60
KGSRARLNFP ELEENFPKPA SSSAEHIQMA AQEAAMWFKR QIQGQEVNEC GGDYAKSGLV  120
PARVGLSSSQ IEALYESPLD SPKMWMELTG AFFSAEPMVF YGQEEFEHSE EFMLTDSKCD  180
VCKEPFWRLA SHSLLFSSVT GSKQRIVDSL PMVSFALHHL SAFQEANDHS LPLLAMPVPY  240
LGLCLLIPIT RQFIAGLSKR FDFLTLEELL QQGKRYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.11e-40ERF family protein