PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21658.4 Da PI: 4.6511 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.6e-20 | 14 | 65 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv+eIr+p + ++r++lg+f+t+e+Aa+a++ a+ l+g XP_027150177.1 14 SVYRGVRKRK-WGKWVSEIREPAGD--KRRIWLGSFDTPEMAAAAYDTAAFHLRG 65 78*****999.**********9666..4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
MESNNVKKKV GTPSVYRGVR KRKWGKWVSE IREPAGDKRR IWLGSFDTPE MAAAAYDTAA 60 FHLRGQAAQL NFPHLVDYLP SPASSSVEDM RLAAQEGSLL LKKSIGDQQN YDDQAAAGIP 120 VTVVDYVAQP VTVGLSQREI QAIHDLPLES PNYNMWMEMT SGSKFLGDPV IFPDDCDLEM 180 TDYVEVPDDS LWNH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 23 | KKKVGTPSVYRGVRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 2e-47 | ERF family protein |