PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027150154.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 168aa MW: 18521.7 Da PI: 5.0425 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.5 | 4.3e-15 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++G+r++k +g+Wv+eIr+p g + r +lg++ +e Aa a++ a +l+ XP_027150154.1 17 RFRGIRRRK-WGKWVSEIRVP---G-TqDRLWLGSYAAPEAAAMAHDIAYYCLRE 66 79****998.**********8...3.35************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence |
MSSSDEGGSS CSTSQKRFRG IRRRKWGKWV SEIRVPGTQD RLWLGSYAAP EAAAMAHDIA 60 YYCLRENASL DDFNFPVMLP AGVQRGMSPR SVQKAATDAG MAVDAQIIAK RPADSPVKVE 120 ENVVNSRPEE RFSPCGNDGF SDIPSWEGKE FSRELGDQAL NISVDDYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71520.1 | 3e-43 | ERF family protein |