PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027150090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 281aa    MW: 31710.9 Da    PI: 9.6295
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027150090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.27.9e-07120139120
                     EEETTTTEEESSHHHHHHHH CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                     ++C++C+k+F+r  nL+ H+
  XP_027150090.1 120 FSCHICSKTFNRYNNLQMHM 139
                     89*****************9 PP

2zf-C2H210.80.0015204226123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cgk+   k + ++H +++
  XP_027150090.1 204 FSCRKCGKCLAVKGDWRTHEKNC 226
                     89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MENSNSNMSF TSSLSLFASS SSAADHKIIQ HFNFFPERKS QSSQESQKSS DLEKNPSSFG  60
DEKEDVTISL HIGPPSTCTR VASLSLNDYE KGVENLATGF SPAPYWIPTR AQILVGFTHF  120
SCHICSKTFN RYNNLQMHMW GHGSQYRKGP ESLKGTRPKA MLLIPCYCCE EGCKNNINHP  180
RARPLKDFRT LQTHYKRKHG TKRFSCRKCG KCLAVKGDWR THEKNCGKRW HCMCGSDFKH  240
KRSLKDHIAS FGSGHGPSPP PPPSIDAIDL HESTRTRSLF V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.14e-96C2H2 family protein