PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | C2H2 | ||||||||
Protein Properties | Length: 281aa MW: 31710.9 Da PI: 9.6295 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21.2 | 7.9e-07 | 120 | 139 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C+k+F+r nL+ H+ XP_027150090.1 120 FSCHICSKTFNRYNNLQMHM 139 89*****************9 PP | |||||||
2 | zf-C2H2 | 10.8 | 0.0015 | 204 | 226 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+ k + ++H +++ XP_027150090.1 204 FSCRKCGKCLAVKGDWRTHEKNC 226 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MENSNSNMSF TSSLSLFASS SSAADHKIIQ HFNFFPERKS QSSQESQKSS DLEKNPSSFG 60 DEKEDVTISL HIGPPSTCTR VASLSLNDYE KGVENLATGF SPAPYWIPTR AQILVGFTHF 120 SCHICSKTFN RYNNLQMHMW GHGSQYRKGP ESLKGTRPKA MLLIPCYCCE EGCKNNINHP 180 RARPLKDFRT LQTHYKRKHG TKRFSCRKCG KCLAVKGDWR THEKNCGKRW HCMCGSDFKH 240 KRSLKDHIAS FGSGHGPSPP PPPSIDAIDL HESTRTRSLF V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 4e-96 | C2H2 family protein |