PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027150059.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 146aa MW: 16553.2 Da PI: 4.568 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.6 | 2.4e-16 | 21 | 67 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 ++y GVr++ +gr++AeIr p++ + r++lg+f+taeeAa a++ a XP_027150059.1 21 TRYLGVRRRQ-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDLASI 67 5799***887.**********865...5*******************9965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MENFSQMVAR DQGRRSSRRS TRYLGVRRRQ WGRYAAEIRN PYTKERHWLG TFDTAEEAAV 60 AYDLASISFS GIQKARTNFV YPFLALPTPS PPSPPPPPPP TPDLEEVDQS CAEVSSFEDD 120 DDDESLFIAS VLESFRQSSF DGIQKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18560.1 | 4e-29 | ERF family protein |