PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149966.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 899aa MW: 99184.5 Da PI: 6.6146

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.6	2.9e-29	577	628	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l++yF++++kdAA+++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_027149966.1 577 AEKTITLQMLRQYFAGSLKDAARNIGVCPTTLKRICRQHGIKRWPSRKIKKV 628 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 899 aa Download sequence
MNEYGNVSTQ NTISGAEGSD SLVDLDCMDE LLLEGCWLET TEGPELLSDS PSDFNALFDA 60 SFTWPILEAI NGESNPLKST EEERQRLSFS ENLSASPSQG RNSAKSESQD GNAVCSPSLS 120 GNFSAESSAL SRRLWIGPRA STSVMDRLIK ALGYMKDWAG DKNALIQIWV PVNKGGRRVL 180 TTNDQPFSLD LNCPRLASYR NVSVNYQFST EEDLKESVGL PGRVFMGRVP EWTPDVQFFR 240 TDEYPRVGHA QQYDVRGTLA VPIFEQGSRN CLGVIEVVLT TQKINYRPEL ESVCRALQAV 300 NLRSSDVSGA QNSKACDFSY QSALPEIQEI LRAACGTYSL PLAQTWVPCI KQGKGGCRHS 360 DENLVRCVST VDSACYIADS HVQGFSDACS EHHLLKDYPL SHHARIFGLC AAVAIRLRSI 420 YSGSTDFVLE FFLPVDCKDT EEHQKMLSSL SLIIQKFCRG LRVITDKELL EENSVPSGGV 480 SIPSYIKFGE EMSKTEHRHS AMASQRSFWT SRRAEVEETA VVASKIQNAK PAEMLSGKFS 540 AARQSLPDIS MCGDSLTRGQ CSLLDVSKTA EKRGAKAEKT ITLQMLRQYF AGSLKDAARN 600 IGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIQRVID SVQGASGSLQ IESFYTNFPE 660 LASPNLTTAA PFSCFNSSDH PISLNTQPEA STLSPRASAS KSPSSSCSHS SSSSQCCSTG 720 TQPHPHTLKI SGQEDLVKNN STGFMLKRVR SDAQLDLPSD GPKFLPRSHS HVSFTEHPDP 780 ENLPPAPKET SWMSREGTTL RIKVTYGEEK IRFRMLNNWG YRDLLREVSG RFGVDDTTGF 840 QLKYMDDDSE WILLTCDADL EECLDICRSS QSQTVKLSFL CASHPLHGSP SGSRSCDIS

Sequence ? help Back to Top

Protein Sequence Length: 899 aa Download sequence

MNEYGNVSTQ NTISGAEGSD SLVDLDCMDE LLLEGCWLET TEGPELLSDS PSDFNALFDA  60
SFTWPILEAI NGESNPLKST EEERQRLSFS ENLSASPSQG RNSAKSESQD GNAVCSPSLS  120
GNFSAESSAL SRRLWIGPRA STSVMDRLIK ALGYMKDWAG DKNALIQIWV PVNKGGRRVL  180
TTNDQPFSLD LNCPRLASYR NVSVNYQFST EEDLKESVGL PGRVFMGRVP EWTPDVQFFR  240
TDEYPRVGHA QQYDVRGTLA VPIFEQGSRN CLGVIEVVLT TQKINYRPEL ESVCRALQAV  300
NLRSSDVSGA QNSKACDFSY QSALPEIQEI LRAACGTYSL PLAQTWVPCI KQGKGGCRHS  360
DENLVRCVST VDSACYIADS HVQGFSDACS EHHLLKDYPL SHHARIFGLC AAVAIRLRSI  420
YSGSTDFVLE FFLPVDCKDT EEHQKMLSSL SLIIQKFCRG LRVITDKELL EENSVPSGGV  480
SIPSYIKFGE EMSKTEHRHS AMASQRSFWT SRRAEVEETA VVASKIQNAK PAEMLSGKFS  540
AARQSLPDIS MCGDSLTRGQ CSLLDVSKTA EKRGAKAEKT ITLQMLRQYF AGSLKDAARN  600
IGVCPTTLKR ICRQHGIKRW PSRKIKKVGH SLQKIQRVID SVQGASGSLQ IESFYTNFPE  660
LASPNLTTAA PFSCFNSSDH PISLNTQPEA STLSPRASAS KSPSSSCSHS SSSSQCCSTG  720
TQPHPHTLKI SGQEDLVKNN STGFMLKRVR SDAQLDLPSD GPKFLPRSHS HVSFTEHPDP  780
ENLPPAPKET SWMSREGTTL RIKVTYGEEK IRFRMLNNWG YRDLLREVSG RFGVDDTTGF  840
QLKYMDDDSE WILLTCDADL EECLDICRSS QSQTVKLSFL CASHPLHGSP SGSRSCDIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein