PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027149908.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 365aa MW: 39761.8 Da PI: 9.9339

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027149908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.2	1.3e-31	293	350	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ XP_027149908.1 293 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDPTMLIVTYEGEHNHS 350 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MAVELMTGFR NDTFASKMEE SAVQEAATAG LQSVEKLIRL LSQSQSQPSQ IYQDPSSKQS 60 SDYQAVADAA VNKFKKFISL LDRTRTGHAR FRRGPVTNPP QPAPPLPPTQ QPEQPQPQRQ 120 PPQSNPAATS QPANNLFQED DDKEKVKSSS RIYCPTPIQG LPPLPHNHHQ LMKNVNIERK 180 ESSTTINFAA ASPVNSFMSS LTGDTESMQP SMSSGFQITN LSSHVSSAGK PPLSTSSLKR 240 KCSSMDDSAV KCGGGGAASS GGRCHCPKKR KSRVKRVVRV PAISMKMADI PPDDYSWRKY 300 GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPTMLI VTYEGEHNHS HSATEAPGAL 360 VLESS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MAVELMTGFR NDTFASKMEE SAVQEAATAG LQSVEKLIRL LSQSQSQPSQ IYQDPSSKQS  60
SDYQAVADAA VNKFKKFISL LDRTRTGHAR FRRGPVTNPP QPAPPLPPTQ QPEQPQPQRQ  120
PPQSNPAATS QPANNLFQED DDKEKVKSSS RIYCPTPIQG LPPLPHNHHQ LMKNVNIERK  180
ESSTTINFAA ASPVNSFMSS LTGDTESMQP SMSSGFQITN LSSHVSSAGK PPLSTSSLKR  240
KCSSMDDSAV KCGGGGAASS GGRCHCPKKR KSRVKRVVRV PAISMKMADI PPDDYSWRKY  300
GQKPIKGSPH PRGYYKCSSL RGCPARKHVE RALDDPTMLI VTYEGEHNHS HSATEAPGAL  360
VLESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	2e-89	WRKY family protein