PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027149743.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 452aa    MW: 51741.1 Da    PI: 5.606
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027149743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.0011164187123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     y C+ Cg+ ++++ +Lk+H r  H
  XP_027149743.1 164 YICSVCGRKCKTHLDLKKHFRQlH 187
                     89*****************99877 PP

Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MINSLCTSIE FIHLNSPPFS HYRFPKPLFL IPQFAPQKPP KPLSLSDPNS SGKWANIRAC  60
AAAAAAAESE IDMVRTKEGI YTAKPKKVVV LWDLDNKPPR GPPYQAAMAL KKVAQHFGDL  120
VDISAYANRH AFIHLPQWVV EERREQRRMD ILERKGVSTP SEPYICSVCG RKCKTHLDLK  180
KHFRQLHERE RQKKLNRMRS LKGKKRQRFK ERFIDGNEKY NEAARTLTSP KVGYGLASEL  240
SRAGVFVKTV EDKPQAADWA LKRQMQHSMS RGIDWLLLVS DDSDFSEMLR RARAANLGTV  300
VIGDGYRALG RQADLWVPWN DVENGEIKED DLVSRIKRRR ESGGRRTGRF SVSEFDGGLN  360
GEGSVDSLMD QLVGTTEFDG MRISAFSEGE EEEDEDREEE QDWLRENQRG YVQIGLKNSI  420
DDEEDPDEYT EEEDYVLDSE EEGVEEDGLQ FW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-149C2H2 family protein