PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148938.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 269aa    MW: 30359 Da    PI: 6.3096
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM96.63.9e-30171511128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lppG rF P++++lv++yL+ k +g+++  ++vike+d+y+++P +Lp+    ++ ++ +  +wy +++r     +++ ++r++  gyWk+ g+ 
  XP_027148938.1  17 LPPGSRFYPSEQQLVCYYLTSKNNGTNCYGKDVIKELDLYNFNPFNLPEsgcfRFGSGGRrrHWYCYVRRVV--LRERGRTRVAGGGYWKKRGRV 109
                     79**************************999*****************557774445444126666666655..55566789999********** PP

             NAM  90 kevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     ++v+++  ++ +vg++k++ fy+g +++++++t+Wv+ ey+l
  XP_027148938.1 110 RDVIEAgaGKVVVGTRKSFDFYSGdSHENAVRTRWVLYEYAL 151
                     ****99777788**********996778899*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MRGEDPKPPD DPTSFCLPPG SRFYPSEQQL VCYYLTSKNN GTNCYGKDVI KELDLYNFNP  60
FNLPESGCFR FGSGGRRRHW YCYVRRVVLR ERGRTRVAGG GYWKKRGRVR DVIEAGAGKV  120
VVGTRKSFDF YSGDSHENAV RTRWVLYEYA LIDHHMGSFV LCRVFNKSDL GHNLSEHNIS  180
SCGEESVATV RHIGVQYDGS VTSVIEESKM HDKGTQNDDN EVLKLPTGQG NELDETISLK  240
PVSEQDLKTI LEGDYIEVDD LLCSLPGVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.28e-21NAC family protein