PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148698.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 304aa    MW: 32270.8 Da    PI: 5.4321
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148698.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.9e-17220256135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp g++tLCnaCGl+++ kg+
  XP_027148698.1 220 CTHCGTSSksTPMMRRGPAGPRTLCNACGLFWANKGT 256
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MYTPVQLVGP TNGHGQYSSH GGGDDVKAAV FGGGGGGRES IEDTEIVGFE DGGTIGGLDG  60
IEVSLPQNTT LYGGGGEGVA MAMPHGGDVA NQLTLSFRGQ VYVFDAVTAE KVQAVLSLLG  120
GCEYAPGTQA VDLPYQTSKG LMDYSGRCND PKRVESLNRF RQKRKERCFD KKIRYNVRQE  180
VAMKMQRKKG QFAPRSSEDS VACDVAEESG QIDNPPETSC THCGTSSKST PMMRRGPAGP  240
RTLCNACGLF WANKGTLRDL SKKTHAVTEE DEADSDSDYG TPISARGNLV SFSTSTSSAV  300
AAEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.24e-77GATA family protein