PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148448.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 399aa    MW: 44114.6 Da    PI: 8.4559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.2e-1981129355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr++  +g+WvAeIr+p++     r +lg+fgta eAa a+++a++ ++g
  XP_027148448.1  81 YRGVRQRT-WGKWVAEIREPKK---GSRLWLGTFGTAIEAALAYDKAARVMYG 129
                     9****999.**********954...4**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MSPLKPASDE TSLTLGPFGR KNSKRRSDAS KHVAETLNKW KEYFDKIESI NGKLVRKAPG  60
RGSKKGCMKG KGGPENSRHN YRGVRQRTWG KWVAEIREPK KGSRLWLGTF GTAIEAALAY  120
DKAARVMYGP SAQLNLPNYN VVKEASTEPS LELTMSIPES TLTTSHAEFA KAEDSKVTSE  180
TSYHSASVPS KAGKEEMVTS FPEHGEKGSS SPLLSSVESQ VVHENSKSSC NDEASQHVID  240
SPTERKEVTD KSGPMDEGCK TMYEENSENS TKECIIPRGL EKSDSNYECV EEMPLAEWFA  300
EIRNRNMRDR LPLGTVGTAR SINGASSWLK LSNDCSKVST RESFLVPTVL ASNCKTTSKC  360
KNESPEVFIY HLTMAFSYML GCSVSSGYMS DLSVPRLWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.24e-36ERF family protein