PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148352.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 308aa    MW: 35115 Da    PI: 7.0974
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148352.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.93.3e-5271311128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv++yL++k++++ + +  +i+e+d+yk++PwdLp  +  +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + 
  XP_027148352.1   7 LPPGFRFHPTDEELVMHYLCRKCASQVIAV-PIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGN- 99 
                     79*************************999.88***************6555679*************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + vg+kk Lvfy g+apkgekt+W+mheyrl
  XP_027148352.1 100 -PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 131
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGSDLQLPPG FRFHPTDEEL VMHYLCRKCA SQVIAVPIIA EIDLYKYDPW DLPGLALYGE  60
KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGNP KPVGIKKALV FYAGKAPKGE  120
KTNWIMHEYR LADVDRSARK KNNNNLRLDD WVLCRIYNKK GSIDKQQVSS ISRKMMMMSN  180
SRQVEETEED KKPVIMTSLA ETSPVVYSDF MYLDPADSVP KLHTDSSCSE QVVSPEFSSH  240
NTCEVQSERK LSDWEKAALD FPFNYVDAPA MDSTGNALMN PPPPPPHFQG TYQMSPLQDM  300
FMYLQKPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-143NAC family protein