PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027148245.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 370aa    MW: 40869.2 Da    PI: 6.1322
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027148245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51e-20193242255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_027148245.1 193 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAFKLRG 242
                     59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MAAAMDFWNS TPLDLQLDPF KGGELMEALE PFMKSGASSP SYSSSYYNPQ SFSTASPSSF  60
PSMDDQFFSF SSSSPSTSSS APYNSPSSSS FPAQYQAQFN MYPESCYSSQ STYGLVDQQG  120
SLGLNQLTPS QIHDIQSRFS LQNENQHHMI SGPFHQHWPA TRQSQSQQQA LPFLAPKPVP  180
MKHSASPPKP TKLYRGVRQR HWGKWVAEIR LPKNRTRLWL GTFDTAEEAA LAYDKAAFKL  240
RGDFARLNFP HLRHNGSLIG GDFGEYKPLH SSVDAKLQAI CQSLAEGKSI DGKKSKGTRR  300
KAAEEEKAAA KTVDAESESE TGSGHVTDGS SPVSDLTVPD FTEEEGTWEA CSENLMLEKY  360
PSYEIDWAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.12e-72ERF family protein