PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027148231.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

TALE

Protein Properties

Length: 720aa MW: 79694 Da PI: 7.2252

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027148231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	463	500	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ L++++gL+++qV++WF N R + XP_027148231.1 463 FEHflHPYPSDADKHLLSRQTGLSKNQVSNWFINARVR 500 664559******************************88 PP
2	BELL	110.3	1.1e-35	323	394	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++e q+kk+kLls+l+eVd rY +y+eq+q+++ sF+ v+g+g+a+pYt+lA+ka+SrhFr++k+ai +q+ XP_027148231.1 323 EKTEYQRKKVKLLSMLDEVDARYTHYCEQMQAIVHSFDSVIGYGAAAPYTNLAQKAMSRHFRSIKEAILGQV 394 57899****************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MSQSFHQGIY SFSNGYERSP TTTKQGMEWI SQRVQNFELQ QQQQVQTEVN SGEPPVYDDT 60 GGGMLTEMID FSRGRGKSAN HLLLDGQIPS SYRWSQKQQL PLTVVNEAEL LLMNPLHVKA 120 SSSSPTSTSS LHMSVPNSSD SHHPSLHLQE YHLENPSQFS WVRVNGNEVD DDNTKIGRAM 180 EAQGLSLSLS SSMPNLEAAK FQELRPGDGG VYFFDQGVGP PMNFSGFKNQ EPNPNILGNI 240 VTDYSSQVHV GLPASSRIGN VLRNPRYLRA AQELLEEFCC VGKGNLKSPK SENPRTISIV 300 ENASGGAVSS ASSKDRPPLS AAEKTEYQRK KVKLLSMLDE VDARYTHYCE QMQAIVHSFD 360 SVIGYGAAAP YTNLAQKAMS RHFRSIKEAI LGQVKVTCEL LGDKDVNGTI GLTKGETPRL 420 RLLEQKFRQQ KALHQLGMLD PETWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS 480 RQTGLSKNQV SNWFINARVR LWKPMVEDIY KEETKDEEQK KVTTVNHHAA NELAKSVDSV 540 DEEDHHNQNQ NQNQNHNIVS AQTPMTNSKT TTATTILSSS ITTMTLVDGR RSEINAVEKD 600 PSKNTINNGQ YTLGNQAILQ GTPSTTTPTS LISSPTFGHH HGQTLPTYGC FMAIPDEAHV 660 GMHGNATSRA TNNINTTGSL VGMGSTSQAG DVSLTLGLRH PSSNLPRKRT EFSLRDFGAF

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MSQSFHQGIY SFSNGYERSP TTTKQGMEWI SQRVQNFELQ QQQQVQTEVN SGEPPVYDDT  60
GGGMLTEMID FSRGRGKSAN HLLLDGQIPS SYRWSQKQQL PLTVVNEAEL LLMNPLHVKA  120
SSSSPTSTSS LHMSVPNSSD SHHPSLHLQE YHLENPSQFS WVRVNGNEVD DDNTKIGRAM  180
EAQGLSLSLS SSMPNLEAAK FQELRPGDGG VYFFDQGVGP PMNFSGFKNQ EPNPNILGNI  240
VTDYSSQVHV GLPASSRIGN VLRNPRYLRA AQELLEEFCC VGKGNLKSPK SENPRTISIV  300
ENASGGAVSS ASSKDRPPLS AAEKTEYQRK KVKLLSMLDE VDARYTHYCE QMQAIVHSFD  360
SVIGYGAAAP YTNLAQKAMS RHFRSIKEAI LGQVKVTCEL LGDKDVNGTI GLTKGETPRL  420
RLLEQKFRQQ KALHQLGMLD PETWRPQRGL PERSVNILRA WLFEHFLHPY PSDADKHLLS  480
RQTGLSKNQV SNWFINARVR LWKPMVEDIY KEETKDEEQK KVTTVNHHAA NELAKSVDSV  540
DEEDHHNQNQ NQNQNHNIVS AQTPMTNSKT TTATTILSSS ITTMTLVDGR RSEINAVEKD  600
PSKNTINNGQ YTLGNQAILQ GTPSTTTPTS LISSPTFGHH HGQTLPTYGC FMAIPDEAHV  660
GMHGNATSRA TNNINTTGSL VGMGSTSQAG DVSLTLGLRH PSSNLPRKRT EFSLRDFGAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-121	TALE family protein