PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024997024.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 362aa MW: 38228.2 Da PI: 7.345

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024997024.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.3	5e-11	263	295	1	33
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 ++elkrerrkq+NRe+ArrsR+RK++++++ e+ XP_024997024.1 263 DRELKRERRKQSNRESARRSRLRKQEKLKNTER 295 689*************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGIHEEEKPC KPEKSSSPPT QEQEQQQQQT NVHVYPDWMA MQAYYGPRMA VPPYFNSALA 60 AGHGPPPYMW GPPQHMMPPY AAFYPHGGVY AHPGVHLATS PLNVDSPAKS SGDSDRGLMK 120 KLKGFDGLAM SIGNGNGDGA EGGNDNGISH SGETEGSSEG SDGNTTEGGQ VGRKRSHEGS 180 PILPAVGKSE THSGELLSTG ADGTSSKTSG VAVASAKVSG KAGGVLSANP ITELNLKNSP 240 TAAANMTSSF VPLIPNENLL QNDRELKRER RKQSNRESAR RSRLRKQEKL KNTERGVMED 300 PRCNKGSGSS LSTANLLSRV DNSSGCVVRN EGESEVNKDP DSGAKLRQLL DSSPRADAVA 360 AG

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGIHEEEKPC KPEKSSSPPT QEQEQQQQQT NVHVYPDWMA MQAYYGPRMA VPPYFNSALA  60
AGHGPPPYMW GPPQHMMPPY AAFYPHGGVY AHPGVHLATS PLNVDSPAKS SGDSDRGLMK  120
KLKGFDGLAM SIGNGNGDGA EGGNDNGISH SGETEGSSEG SDGNTTEGGQ VGRKRSHEGS  180
PILPAVGKSE THSGELLSTG ADGTSSKTSG VAVASAKVSG KAGGVLSANP ITELNLKNSP  240
TAAANMTSSF VPLIPNENLL QNDRELKRER RKQSNRESAR RSRLRKQEKL KNTERGVMED  300
PRCNKGSGSS LSTANLLSRV DNSSGCVVRN EGESEVNKDP DSGAKLRQLL DSSPRADAVA  360
AG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	280	286	RRSRLRK
2	280	287	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.2	1e-44	bZIP family protein