PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024997022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bZIP | ||||||||
Protein Properties | Length: 404aa MW: 42937.5 Da PI: 6.6854 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 68.8 | 8.9e-22 | 263 | 325 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++elkrerrkq+NRe+ArrsR+RK+ae eeL+ kv++L +eN +L++e+++l+++++klk e+ XP_024997022.1 263 DRELKRERRKQSNRESARRSRLRKQAEAEELAVKVEALNNENLTLRSEINKLTDNSEKLKLEN 325 689*********************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 404 aa Download sequence |
MGIHEEEKPC KPEKSSSPPT QEQEQQQQQT NVHVYPDWMA MQAYYGPRMA VPPYFNSALA 60 AGHGPPPYMW GPPQHMMPPY AAFYPHGGVY AHPGVHLATS PLNVDSPAKS SGDSDRGLMK 120 KLKGFDGLAM SIGNGNGDGA EGGNDNGISH SGETEGSSEG SDGNTTEGGQ VGRKRSHEGS 180 PILPAVGKSE THSGELLSTG ADGTSSKTSG VAVASAKVSG KAGGVLSANP ITELNLKNSP 240 TAAANMTSSF VPLIPNENLL QNDRELKRER RKQSNRESAR RSRLRKQAEA EELAVKVEAL 300 NNENLTLRSE INKLTDNSEK LKLENAKLME KLKNTERGVM EDPRCNKGSG SSLSTANLLS 360 RVDNSSGCVV RNEGESEVNK DPDSGAKLRQ LLDSSPRADA VAAG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 280 | 286 | RRSRLRK |
2 | 280 | 287 | RRSRLRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.2 | 1e-44 | bZIP family protein |