PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024996986.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 429aa    MW: 48286.4 Da    PI: 6.4357
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024996986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.7e-12253297554
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     h e+Er+RR+++N++f  Lr+++P       +K++Ka+ L  A+ YI +L
  XP_024996986.1 253 HVEAERQRREKLNHRFYALRSVVPYV-----TKMDKASLLADATTYIDEL 297
                     889**********************8.....8***************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MSQTSLQTRL KFILQSRPER WLYAIFWQAS KETDGRLVLL WADGYFPGTN SDLPDSRRNG  60
NDHLMLSYDD DVSDSQWLIM SSVEMCFPAG HDVVGRSFIS GSHLWLAGDM ELKKYKSKRA  120
EEVRVHGIKS LVCIPTSNGV VELGSCDTAK EDGGLIQLTK SIFEPDGFFN INLAQIVDEC  180
EIPNRGIWNQ VREEGQEEVT LKKMNXSSSN SDPFDLDSSS PSTTNITSLP KKRGRRAKGA  240
TAQPAEVMPP GYHVEAERQR REKLNHRFYA LRSVVPYVTK MDKASLLADA TTYIDELKAR  300
IQTLEKKVGS KSSQIKPPQN EIQMNSNYHE YNPIQNSKTF SSDLAANRFE VDVKILGPEA  360
MIRVQSPDMN HPAARLMDAL RSLDLRVHYA SVSSVNDLML QDVIVKVPDG FTTGEETLRV  420
AVLKNMYLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.12e-59bHLH family protein