PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 429aa MW: 48286.4 Da PI: 6.4357 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.7e-12 | 253 | 297 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h e+Er+RR+++N++f Lr+++P +K++Ka+ L A+ YI +L XP_024996986.1 253 HVEAERQRREKLNHRFYALRSVVPYV-----TKMDKASLLADATTYIDEL 297 889**********************8.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MSQTSLQTRL KFILQSRPER WLYAIFWQAS KETDGRLVLL WADGYFPGTN SDLPDSRRNG 60 NDHLMLSYDD DVSDSQWLIM SSVEMCFPAG HDVVGRSFIS GSHLWLAGDM ELKKYKSKRA 120 EEVRVHGIKS LVCIPTSNGV VELGSCDTAK EDGGLIQLTK SIFEPDGFFN INLAQIVDEC 180 EIPNRGIWNQ VREEGQEEVT LKKMNXSSSN SDPFDLDSSS PSTTNITSLP KKRGRRAKGA 240 TAQPAEVMPP GYHVEAERQR REKLNHRFYA LRSVVPYVTK MDKASLLADA TTYIDELKAR 300 IQTLEKKVGS KSSQIKPPQN EIQMNSNYHE YNPIQNSKTF SSDLAANRFE VDVKILGPEA 360 MIRVQSPDMN HPAARLMDAL RSLDLRVHYA SVSSVNDLML QDVIVKVPDG FTTGEETLRV 420 AVLKNMYLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00870.1 | 2e-59 | bHLH family protein |