PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 185aa MW: 21207.4 Da PI: 7.8045 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 109 | 159 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp+ +g r++lg+f+ta eAa+a+++ + ++g XP_024996969.1 109 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTFDTAIEAAEAYDRTAFMMRG 159 8********.**********96554..**********************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MATPDEAAAL EFIRQHLLDE FESSPIHQIF THHCTTSSSI SSSHSDSSDF TNHSTTYDQT 60 PNTGHFSENE VIKPEILDFV SSNPIEIRSR KARQEFDERS ATRREAERKY RGVRQRPWGK 120 YAAEIRDPKR RGSRVWLGTF DTAIEAAEAY DRTAFMMRGS KAILNFPLEV AKLQKTDDGG 180 QKRNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47230.1 | 4e-37 | ERF family protein |