PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996946.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 225aa MW: 25522.3 Da PI: 8.1945 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.2e-11 | 51 | 96 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+e+ErrRR+riN +++Lr+llP+ K +Ka+ L ++v+ +k+L XP_024996946.1 51 RHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEVVRRVKEL 96 69************************8.....69***********999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MQMQFLPSYI NGYDQFSNNC STIIRDLVGE GTQQLSANTV AEDRAAAASN RHSEAERRRR 60 KRINGHLATL RTLLPNTIKT DKASLLAEVV RRVKELKKMA AEAEVESTSD DDDDYFISRN 120 KEYYMIPSEI DELEVTYVGE DSSMIKACMC CQDRPELMVE LRRALAVVGG KLVRTEIGTL 180 GGRIKCVLWV QIAREQGLPE LRRSLKVVMD QAAFLDLPRN KRPRI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 9e-27 | bHLH family protein |