PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996793.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 138aa MW: 15636.9 Da PI: 8.2263 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.3 | 2.1e-11 | 22 | 104 | 4 | 89 |
E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SE CS B3 4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..se 89 v ++++ k+ +l +p k e+ + ++t++ +g++W++ + ++ +r+ + W +F+ +n+L +gD +vF+l++ s+ XP_024996793.1 22 VISRAHLAKRFQLLIPHKLSEKLpaA---RVPTTII---CHGKTWDLDYMGDQVTKRF-QNQSWGGFATDNKLGTGDACVFELMEGgsSS 104 56677888999999999999888532...3445666...69********766666665.567********************88441233 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MLEPQGDAEF WPLSGKPFFY VVISRAHLAK RFQLLIPHKL SEKLPAARVP TTIICHGKTW 60 DLDYMGDQVT KRFQNQSWGG FATDNKLGTG DACVFELMEG GSSSSRIKFR VQILRNKFPA 120 ELMENAEGYN MNNPINID |