PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024996685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 506aa MW: 55970.8 Da PI: 6.5497 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 95 | 5e-30 | 140 | 244 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 f+k+ tpsdv+k++rlv+pk++ae++ ++ + ++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g + XP_024996685.1 140 FDKAVTPSDVGKLNRLVIPKQHAERYfpldSSTNDKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFQRGvGVtGK 234 89***************************9555568889************************************************65477778 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +l++ ++r+ XP_024996685.1 235 DRLFIDWRRR 244 8888888875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 506 aa Download sequence |
MNFMGKSDDD GGNGGRQQRE EDYSFWEDEE EKGKPPPTAD RLFSSSVSDH HQHSRHQPQE 60 KSFLSPPPYH HHHCGGGWLL DGHSQGGEPS SRFDPMTVDS SLVSVTPVAG DGDGDGDGGA 120 HGRHEEEESS GTEVEREHMF DKAVTPSDVG KLNRLVIPKQ HAERYFPLDS STNDKGLLLN 180 FEDRNGKLWR FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DVVSFQRGVG VTGKDRLFID 240 WRRRLDASIN PPPYQLSSSS SSNLSFPLIS HQNFPFHTRN SNINTHPWNP LVLQSHPALP 300 WRNPNLMLPP TNSYPSSSYT RGSPYGSVVN VNKNGSRSVI YFGPDGCRSP QQQIQMMQMQ 360 QRRGFGVGIG IDPPPPPPTA AVAASPTPPA VILESLPQVH GKASGKRLRL FGVNMDCPFT 420 EEDDQDYEPP SELNPTTTNC DHNRSPPLIP PSISSSSTIP YLQLRPHGGG TEYNQSTILS 480 SSSSAHAFNI VSKSTASTNM PLDLDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46870.1 | 1e-60 | B3 family protein |