PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024995757.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | Trihelix | ||||||||
Protein Properties | Length: 250aa MW: 28207.7 Da PI: 4.4803 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 43.2 | 1e-13 | 19 | 93 | 2 | 76 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 Wt +e l L++ ++ +e + r++ + ++W+ + +++ + g++r+ +qC+ kw++l +ykkik++ +k++s +s XP_024995757.1 19 WTVEESLILVNEVSAVEADCRDTLASFQKWKIIVENCNALGVNRNLNQCRRKWDSLLSDYKKIKQSGSKKASFNS 93 *****************************************************************9999754444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MEQDGVGALR TRSKVAPDWT VEESLILVNE VSAVEADCRD TLASFQKWKI IVENCNALGV 60 NRNLNQCRRK WDSLLSDYKK IKQSGSKKAS FNSDLFKVIE WYVREYEGGC DTDPDSDPEA 120 VPEPVLASMV QSGSKKQRSK IIPQKRSIED TPKPKRHIKS EEIKVEESCS EPTNDILNGS 180 MRPEETNQEQ QEQAMADTLR ENAELIEAIV KEDSMNDEST IDLTRLNGDK LIVCLSNLVV 240 ALDQLSEFVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 3e-49 | Trihelix family protein |