PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024995608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | ERF | ||||||||
Protein Properties | Length: 174aa MW: 19188.1 Da PI: 4.5571 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.9e-19 | 14 | 64 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv+eIrdp++ + r++lg+f+t+e+Aa+a++a +++g XP_024995608.1 14 SVYRGVRKRK-WGKWVSEIRDPVT---KSRIWLGSFDTPEMAAAAYDAVSFYFRG 64 78*****999.**********754...5*******************98887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MSDTHSSASG GTSSVYRGVR KRKWGKWVSE IRDPVTKSRI WLGSFDTPEM AAAAYDAVSF 60 YFRGDCARLN FPQMATALPR PATPSADDIR VAAHEAAMLL KPSTSEIDTG SSSGHSVPTN 120 VGLSPSEIQA INDLPLDSHE TWMEYNNDPT MYYSNPASFD HNWDEVPDDS LWDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 4e-57 | ERF family protein |