PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024995505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bZIP | ||||||||
Protein Properties | Length: 158aa MW: 18297.4 Da PI: 5.6614 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.4e-11 | 72 | 123 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK+ ++ eL L + N++L ++l++l + XP_024995505.1 72 RKRRRMISNRESARRSRVRKQRQLNELLSQLVRLRTDNHSLVEQLNHLAESH 123 5789**************************************9999888764 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MSPQMPQFQC MAPEENPSAF STFSIQDPIS VLHMSNLFTN IPDYFSAYPS SLSNNSTSDE 60 ADDQQMDMIN ERKRRRMISN RESARRSRVR KQRQLNELLS QLVRLRTDNH SLVEQLNHLA 120 ESHKRAVEEN AQLTEESTDI RRMLDEIQLA NASTNMLP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 76 | RKRRR |
2 | 85 | 91 | RRSRVRK |
3 | 85 | 92 | RRSRVRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13600.1 | 2e-37 | bZIP family protein |