PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024995438.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 418aa    MW: 46095.3 Da    PI: 7.2112
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024995438.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.21.1e-3042144197
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++ + ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g   +
  XP_024995438.1  42 FDKVVTPSDVGKLNRLVIPKQHAERYfpldSSTNDKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGvGGsAK 136
                     89***************************9555568889************************************************54444466 PP

                     E..EEEEE CS
              B3  90 felvvkvf 97 
                      +l++ ++
  XP_024995438.1 137 DRLFIDWR 144
                     66777666 PP

Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MMLDYSSVSV TPASGNNNDD DQQSSPQAAG GMMMVVEREH MFDKVVTPSD VGKLNRLVIP  60
KQHAERYFPL DSSTNDKGLL LNFEDRNGKP WRFRYSYWNS SQSYVMTKGW SRFVKDKKLD  120
AGDIVSFQRG VGGSAKDRLF IDWRHRPDAP TPPYQLSSNL SFPLPHHQFS FPTRNSAGMN  180
IHPWNPLFLQ SQPAPSRSHS NLMLQSPNSY VPSSYRYGST GGPYHNIGTG SVVNVNQGGS  240
GSVIYFRSGG GGIPQQQQVD MMQMQQRSGV GIDPPALPAP PPPPPAVVFE SVPVVHGKAA  300
AKRLRLFGVN MDCPISDDDD QDYDPAIELS PTTASASTTT NPIPMGHYNH ANYHHDHFPP  360
HHHPPPQSSS TIPYLQLRPY GGETQFHQST MVSSSSTDAL NKTSKSSSSD HMSLDLDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.15e-72B3 family protein