PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 285aa MW: 30936.3 Da PI: 7.1489 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.1 | 9.7e-11 | 168 | 215 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_024994923.1 168 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 215 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MDPPVMMNGG GFRSGNTGSS LCNLTEIWPF PINLAGGGGG GNAASYGMGQ LGDHAGSTSA 60 FVDNRDHVAM DDPMVVDQRG NSNQSKKRRE DDDSSKGVST SSRSNGNGML DSDGKRLKTL 120 ALESENSESK PEVERSSGKR AENNAKPSEP PKQDYIHVRA RRGQATDSHS LAERARREKI 180 SERMKILQDL VPGCNKVIGK ALVLDEIINY IQSLQQQVEF LSMKLEAVTS RSHPSPQGFP 240 SKDFGQQTFD MAGVAFGSQP TREFSRGSSP EWLHMQIGGS FERTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 7e-87 | bHLH family protein |