PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994923.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 285aa    MW: 30936.3 Da    PI: 7.1489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.19.7e-11168215455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_024994923.1 168 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 215
                     8*************************9....677*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MDPPVMMNGG GFRSGNTGSS LCNLTEIWPF PINLAGGGGG GNAASYGMGQ LGDHAGSTSA  60
FVDNRDHVAM DDPMVVDQRG NSNQSKKRRE DDDSSKGVST SSRSNGNGML DSDGKRLKTL  120
ALESENSESK PEVERSSGKR AENNAKPSEP PKQDYIHVRA RRGQATDSHS LAERARREKI  180
SERMKILQDL VPGCNKVIGK ALVLDEIINY IQSLQQQVEF LSMKLEAVTS RSHPSPQGFP  240
SKDFGQQTFD MAGVAFGSQP TREFSRGSSP EWLHMQIGGS FERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.17e-87bHLH family protein