PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994883.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 367aa    MW: 41132.7 Da    PI: 9.1239
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.92.7e-11251031699
                     EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  16 lvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     l lp  f++++ +k   +kt +l++ +g  sW++k+  +k ++ y +++GW++ +k+ +L+  D+vv +l++   f++ v +f++
  XP_024994883.1  25 LALPTAFVKRYLEK--IPKTPILKTATGeSSWRLKI--KKIGEDYCFSDGWEKLAKDAQLRIMDIVVVSLID--PFTFEVAFFDA 103
                     78*********534..56788999977769******..*******************************987..77778888876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MTTESSEEGP PSFFKVVRCP SAPHLALPTA FVKRYLEKIP KTPILKTATG ESSWRLKIKK  60
IGEDYCFSDG WEKLAKDAQL RIMDIVVVSL IDPFTFEVAF FDANGCDKDL PLNNTKFSGD  120
ADDVDEVMSD EEDDGDEVMP NENLCFQKVI SEKSHRYTMT LPQKFVKAAE LENRSGIRMK  180
DHEGKEWIMG LLVEKYHNRH SLSSAQVLKN KKAGKQENGN RKETPANMEG VKRKRGRPRV  240
EKPGNGNGGG VKVKSEDEAE VIKRKRGRPP LQKHRDGGVK IENQSEVVKR KRGRPRVEGK  300
IKIEDGDGDG DGDCDCDGDG SVVKIKVEKG GFSGVEVKTE TETEVAAVKR KRGRPPLDRS  360
KQRVIYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1263291KRKRGRPPLQKHRDGGVKIENQSEVVKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.19e-10B3 family protein