PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 367aa MW: 41132.7 Da PI: 9.1239 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.9 | 2.7e-11 | 25 | 103 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l lp f++++ +k +kt +l++ +g sW++k+ +k ++ y +++GW++ +k+ +L+ D+vv +l++ f++ v +f++ XP_024994883.1 25 LALPTAFVKRYLEK--IPKTPILKTATGeSSWRLKI--KKIGEDYCFSDGWEKLAKDAQLRIMDIVVVSLID--PFTFEVAFFDA 103 78*********534..56788999977769******..*******************************987..77778888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MTTESSEEGP PSFFKVVRCP SAPHLALPTA FVKRYLEKIP KTPILKTATG ESSWRLKIKK 60 IGEDYCFSDG WEKLAKDAQL RIMDIVVVSL IDPFTFEVAF FDANGCDKDL PLNNTKFSGD 120 ADDVDEVMSD EEDDGDEVMP NENLCFQKVI SEKSHRYTMT LPQKFVKAAE LENRSGIRMK 180 DHEGKEWIMG LLVEKYHNRH SLSSAQVLKN KKAGKQENGN RKETPANMEG VKRKRGRPRV 240 EKPGNGNGGG VKVKSEDEAE VIKRKRGRPP LQKHRDGGVK IENQSEVVKR KRGRPRVEGK 300 IKIEDGDGDG DGDCDCDGDG SVVKIKVEKG GFSGVEVKTE TETEVAAVKR KRGRPPLDRS 360 KQRVIYF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 263 | 291 | KRKRGRPPLQKHRDGGVKIENQSEVVKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 9e-10 | B3 family protein |