PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994882.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 394aa MW: 44338.4 Da PI: 8.6254 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 34.7 | 3e-11 | 25 | 103 | 16 | 99 |
EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 16 lvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 l lp f++++ +k +kt +l++ +g sW++k+ +k ++ y +++GW++ +k+ +L+ D+vv +l++ f++ v +f++ XP_024994882.1 25 LALPTAFVKRYLEK--IPKTPILKTATGeSSWRLKI--KKIGEDYCFSDGWEKLAKDAQLRIMDIVVVSLID--PFTFEVAFFDA 103 78*********534..56788999977769******..*******************************987..77778888876 PP | |||||||
2 | B3 | 51.3 | 2.1e-16 | 143 | 227 | 1 | 89 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+kv s + + ++lp kf+++ +++++++ ++++d +g++W + l ++k+ +r+ l++GW+ F + +L egD+++Fk++++++ XP_024994882.1 143 FQKVI--SEKSHRYTMTLPQKFVKAAELENRSG--IRMKDHEGKEWIMGLLVEKYHNRHSLSSGWSLFRQYYNLSEGDICLFKFIKEEG 227 66766..66677778********9999998776..************************************************998543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MTTESSEEGP PSFFKVVRCP SAPHLALPTA FVKRYLEKIP KTPILKTATG ESSWRLKIKK 60 IGEDYCFSDG WEKLAKDAQL RIMDIVVVSL IDPFTFEVAF FDANGCDKDL PLNNTSDADD 120 VDEVMSDEED DGDEVMPNEN LCFQKVISEK SHRYTMTLPQ KFVKAAELEN RSGIRMKDHE 180 GKEWIMGLLV EKYHNRHSLS SGWSLFRQYY NLSEGDICLF KFIKEEGVLS LAQVLKNKKA 240 GKQENGNRKE TPANMEGVKR KRGRPRVEKP GNGNGGGVKV KSEDEAEVIK RKRGRPPLQK 300 HRDGGVKIEN QSEVVKRKRG RPRVEGKIKI EDGDGDGDGD CDCDGDGSVV KIKVEKGGFS 360 GVEVKTETET EVAAVKRKRG RPPLDRSKQR VIYF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 290 | 318 | KRKRGRPPLQKHRDGGVKIENQSEVVKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 5e-13 | B3 family protein |