PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994882.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family B3
Protein Properties Length: 394aa    MW: 44338.4 Da    PI: 8.6254
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73e-11251031699
                     EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  16 lvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     l lp  f++++ +k   +kt +l++ +g  sW++k+  +k ++ y +++GW++ +k+ +L+  D+vv +l++   f++ v +f++
  XP_024994882.1  25 LALPTAFVKRYLEK--IPKTPILKTATGeSSWRLKI--KKIGEDYCFSDGWEKLAKDAQLRIMDIVVVSLID--PFTFEVAFFDA 103
                     78*********534..56788999977769******..*******************************987..77778888876 PP

2B351.32.1e-16143227189
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+kv   s  + +  ++lp kf+++ +++++++  ++++d +g++W + l ++k+ +r+ l++GW+ F +  +L egD+++Fk++++++
  XP_024994882.1 143 FQKVI--SEKSHRYTMTLPQKFVKAAELENRSG--IRMKDHEGKEWIMGLLVEKYHNRHSLSSGWSLFRQYYNLSEGDICLFKFIKEEG 227
                     66766..66677778********9999998776..************************************************998543 PP

Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MTTESSEEGP PSFFKVVRCP SAPHLALPTA FVKRYLEKIP KTPILKTATG ESSWRLKIKK  60
IGEDYCFSDG WEKLAKDAQL RIMDIVVVSL IDPFTFEVAF FDANGCDKDL PLNNTSDADD  120
VDEVMSDEED DGDEVMPNEN LCFQKVISEK SHRYTMTLPQ KFVKAAELEN RSGIRMKDHE  180
GKEWIMGLLV EKYHNRHSLS SGWSLFRQYY NLSEGDICLF KFIKEEGVLS LAQVLKNKKA  240
GKQENGNRKE TPANMEGVKR KRGRPRVEKP GNGNGGGVKV KSEDEAEVIK RKRGRPPLQK  300
HRDGGVKIEN QSEVVKRKRG RPRVEGKIKI EDGDGDGDGD CDCDGDGSVV KIKVEKGGFS  360
GVEVKTETET EVAAVKRKRG RPPLDRSKQR VIYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290318KRKRGRPPLQKHRDGGVKIENQSEVVKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-13B3 family protein