PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994852.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | HSF | ||||||||
Protein Properties | Length: 504aa MW: 55754 Da PI: 4.6231 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 116.4 | 1.7e-36 | 37 | 129 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws+++nsfvv+d+ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_024994852.1 37 FLVKTYDMVDDPSTDKVVSWSATNNSFVVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 122 9********************999*****************************************999.........****************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i r+ks+ XP_024994852.1 123 IVRRKSA 129 ****985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 504 aa Download sequence |
MEARSYSNAA ASAPDAGSSA PPPAPPPMST VNAPPPFLVK TYDMVDDPST DKVVSWSATN 60 NSFVVWDPPE FARDLLPKYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE GFLRGQKHLL 120 KSIVRRKSAS GHNQQPPQPH AQSSSVGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ 180 QQQTTDNQMQ SMVQRLQGME QRQQQMMSFL AKAVNSPGFL AHFVQQQNES TRLITEGNKK 240 RRYKEDGVVS NDHPSVASSD GRIVKYHPMM NDAAQAMLKQ IMKLDNASPR LGTFSNSPDS 300 YLVGDVSSEA RSGSGVTLQE VNPPASGQSY LPAVTGVLSA PLEANSEVVA TNQFPEASSL 360 VDGQEFPDVS ELSCLQDMAP NASVNISNDY MQSEAQNRAL LDPNLVDEKL SLEIGSFSPD 420 ADMEWDSNLL IEMEKYLTAY DPSLDQFLEQ SPEVDTTDEM DSSPVDDHVM KGNESKPSET 480 ECSRSQVQQL TTQMGLLASN SRKA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 239 | 244 | KKRRYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32330.1 | 1e-112 | HSF family protein |