PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024994656.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 358aa    MW: 40261.1 Da    PI: 6.5092
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024994656.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.84.5e-14140191155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i+  A+e++k+L+
  XP_024994656.1 140 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 191
                     79****************************...9******************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MALETLSSNE LLNFIIYDTI SATPFSCNDS SETTTTNTNP CSSFFFHLEN QNPNPPLNQE  60
LSGAAAAMEI MTSNSSLTTT TAKMSMAVQA YCSGKIPEKN YSNNNNNNNN NQNLGVQGGG  120
KKKRRRRPRV CKNKEEAETQ RMTHIAVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV  180
GGAIEFVKEL EHLLQSLEAQ KFLLTQQQQQ QQQQQQQREE EDSDFADNTK LSSPLPPFSQ  240
FFSYPQYTCS QIPNKYTSKS KAAIADIEVT LIETHANLRI LSQKRLTQLS KMVACFQTLH  300
LSVLHLNITT LDPLVLYSIS VKVEEGCRLN SADEIXGAVH QMLRIIEEEA TLCVDSIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126KKKRRR
2121127KKKRRRR
3122127KKKRRR
4141152RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-67bHLH family protein