PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994656.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 358aa MW: 40261.1 Da PI: 6.5092 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.8 | 4.5e-14 | 140 | 191 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_024994656.1 140 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 191 79****************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence |
MALETLSSNE LLNFIIYDTI SATPFSCNDS SETTTTNTNP CSSFFFHLEN QNPNPPLNQE 60 LSGAAAAMEI MTSNSSLTTT TAKMSMAVQA YCSGKIPEKN YSNNNNNNNN NQNLGVQGGG 120 KKKRRRRPRV CKNKEEAETQ RMTHIAVERN RRKQMNEHLA VLRSLMPESY VQRGDQASIV 180 GGAIEFVKEL EHLLQSLEAQ KFLLTQQQQQ QQQQQQQREE EDSDFADNTK LSSPLPPFSQ 240 FFSYPQYTCS QIPNKYTSKS KAAIADIEVT LIETHANLRI LSQKRLTQLS KMVACFQTLH 300 LSVLHLNITT LDPLVLYSIS VKVEEGCRLN SADEIXGAVH QMLRIIEEEA TLCVDSIN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 126 | KKKRRR |
2 | 121 | 127 | KKKRRRR |
3 | 122 | 127 | KKKRRR |
4 | 141 | 152 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 6e-67 | bHLH family protein |