PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024994561.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | Trihelix | ||||||||
Protein Properties | Length: 258aa MW: 29849.7 Da PI: 6.6893 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 57.4 | 3.9e-18 | 22 | 112 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt++e laLi+a+re++ +lrrg l+ ++W++v++ + +++ qC++k+e+l++ry+++k+++ + + st+ yf+ ++ XP_024994561.1 22 CWTQDEALALIQAYRERWYALRRGYLRTADWDAVAEEVgricPGAIPPKTSAQCRHKMEKLRQRYRAEKQRALSFpGGQFLSTWFYFEAMD 112 8*************************************77644444589**********************999855778899****9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MSATATAVSA AEKPVRRFPP PCWTQDEALA LIQAYRERWY ALRRGYLRTA DWDAVAEEVG 60 RICPGAIPPK TSAQCRHKME KLRQRYRAEK QRALSFPGGQ FLSTWFYFEA MDSMEKNGNG 120 SNPDEETQSD HDDVLGEDEV WMKKPKDRSM DFKEKLGDRI DRNSGHHYFD SENGSNEFSR 180 EKRGIKQDDD SIGQIVSSIK LLADGFVKME KMKMDMVHEI EKMRMEAEMK RNELLLESQK 240 QIVEAFVKGL AENKKQQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44730.1 | 2e-40 | Trihelix family protein |