PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024994147.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 308aa MW: 33358 Da PI: 8.3769

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024994147.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.6e-39	47	108	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+a++cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss XP_024994147.1 47 KEAAINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 108 67899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MDTAHWPQEI AIKPMEEIVV QNGTNSCSSK PSSNSSSLER RGTRPQKEAA INCPRCNSTN 60 TKFCYYNNYS LSQPRYFCKT CRRYWTEGGS LRNVPVGGGS RKNKRSSSSI SSSHSSMSKK 120 LPDLVVPPAA PNPRMHHEHG QDLNLGFPST SHDFKTISEL IQVPNFDGTK NTTSGSATTT 180 TSAQLSALEL LTGMTTRGMM NSFMPIPIPD PNSVYSSSGQ LMIPMPEFKI PSLNFSLDGM 240 GGNGGGGGTY GSSIHDQSSS GRLLFPFEDL KTSTSATTTH DGHHVEQNRD QNGDTNGFWS 300 GMLGGSSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.4	2e-45	Dof family protein