PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024994037.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

BES1

Protein Properties

Length: 660aa MW: 74619.7 Da PI: 6.1842

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024994037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	147.1	1.4e-45	56	182	3	132
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.s 96 + r++++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+ve+DGtt+r++ p+ ++ g +s+es+l+ s XP_024994037.1 56 GSRNEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVEPDGTTFRQS--PP--TSKLGVYPGRSVESPLSsS 146 5799**************************************************************54..44..4567777777777777767 PP DUF822 97 slkssalaspvesysaspksssfpspssldsislas 132 slks +++ ++ ++++ +++psp+slds+ + XP_024994037.1 147 SLKSFPVKASLDFPPSVLRIDESPSPASLDSVVVPG 182 89**************************998764 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MNSNNHDGTH HHHLQPHTDN TSSRSQPQQQ RRPRGFAAAA MGVSTVTTTI NNNPRGSRNE 60 REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVLAALARE AGWIVEPDGT 120 TFRQSPPTSK LGVYPGRSVE SPLSSSSLKS FPVKASLDFP PSVLRIDESP SPASLDSVVV 180 PGRGSTECEK YGASPINSQD CLETDQLMQE GHMVEQVFNF LGTAYIPVYV MLGTGLINKF 240 CQLIDRDAVR KELRLLKSLH VDGVFVDCWW GIVESQGPQK YNWSGYRELF NIVHEFELKL 300 QVGLAFHEYE GNDSGGISIP LPQWVLEIGK ENKDIFFTDH EGRRNTECLS WGVDKERVLK 360 GRTGAEVYFD VMRSFRTEFD DMFVEGLITA VEIGLGASGE LKYPSFSERM GWRYPGIGEF 420 QCYDKYLQQN LRKTSSLRGH TFWARGPENA GNYNSRPQET GFFCEQGDYD SYYGRFFLQW 480 YARSLIDHAN TVLSLASLAF EELQMVVKIP AVNWWYKSRS HAAELTAGYY NPANRDGYSA 540 LFEVLKKYSV AVKFVCSELQ ISSDASDESL ADPEGLTWQV LNSAWEQGLS VSGQNAFLCY 600 DKEVFMRLVE TAKPSNDPDH HHFTSFTFQP PLPLVERTIC FSELNHFIGC MHGENAGTEM

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MNSNNHDGTH HHHLQPHTDN TSSRSQPQQQ RRPRGFAAAA MGVSTVTTTI NNNPRGSRNE  60
REKEKERTKL RERHRRAITS RMLAGLRQYG NFPLPARADM NDVLAALARE AGWIVEPDGT  120
TFRQSPPTSK LGVYPGRSVE SPLSSSSLKS FPVKASLDFP PSVLRIDESP SPASLDSVVV  180
PGRGSTECEK YGASPINSQD CLETDQLMQE GHMVEQVFNF LGTAYIPVYV MLGTGLINKF  240
CQLIDRDAVR KELRLLKSLH VDGVFVDCWW GIVESQGPQK YNWSGYRELF NIVHEFELKL  300
QVGLAFHEYE GNDSGGISIP LPQWVLEIGK ENKDIFFTDH EGRRNTECLS WGVDKERVLK  360
GRTGAEVYFD VMRSFRTEFD DMFVEGLITA VEIGLGASGE LKYPSFSERM GWRYPGIGEF  420
QCYDKYLQQN LRKTSSLRGH TFWARGPENA GNYNSRPQET GFFCEQGDYD SYYGRFFLQW  480
YARSLIDHAN TVLSLASLAF EELQMVVKIP AVNWWYKSRS HAAELTAGYY NPANRDGYSA  540
LFEVLKKYSV AVKFVCSELQ ISSDASDESL ADPEGLTWQV LNSAWEQGLS VSGQNAFLCY  600
DKEVFMRLVE TAKPSNDPDH HHFTSFTFQP PLPLVERTIC FSELNHFIGC MHGENAGTEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45300.1	0.0	BES1 family protein