PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024993711.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

TALE

Protein Properties

Length: 299aa MW: 33744.1 Da PI: 6.4487

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024993711.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.1	1.2e-07	249	281	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+++++++L +++gL+ +q+ +WF N+R + XP_024993711.1 249 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 281 58*****************************87 PP
2	ELK	25.1	4.1e-09	202	223	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_024993711.1 202 ELKIELKQGFRSKIEDVREEIL 223 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MQEQGLGMMG GGGGIGGGFT DMSVSLSGDQ NRQLKAEIAN HPLYEQLLSA HVACLRVATP 60 IDQLPLIDAQ LSQSHHLLRS YIAADHHNQP LSPHDRQDLD NFLAQYLLVL CSFKEQLQQH 120 VRVHAVEAVM ACREIEHNLQ ALTGVTLGEG SGATMSDDED EMPMDFSLDQ SGGIDGSHDM 180 MGFGPLLPTE SERSLMERVR QELKIELKQG FRSKIEDVRE EILRKRRAGK LPGDTTSVLK 240 DWWQQHSKWP YPTEDDKAKL VEETGLQLKQ INNWFINQRK RNWHSNSNSM TALKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	299	RKRNWHSNSNSMTALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-171	TALE family protein