PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024993467.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | bHLH | ||||||||
Protein Properties | Length: 240aa MW: 26996 Da PI: 6.8519 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.4e-11 | 161 | 208 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L+el+P + + k + + +L +++YI+sLq XP_024993467.1 161 SHSLAERLRREKINEKLRSLQELVPGC---Y-KTMGMSVMLDVTINYIRSLQ 208 8*************************9...4.4477789************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MDDHFTLGIN SNMELFDSNA NPALGNFNSS NVSLHGFTPL SGDNFSDHHH HHRRHDHSLP 60 FMPLSDGNLQ SFNFSGDHQD GSFYAPMTHL PSNTDNMAKR ISGDESLGNP PIFSSEVTGE 120 NKANRNYGYG GKRRKKSNEA LGEKPREVVH VRARRGEATD SHSLAERLRR EKINEKLRSL 180 QELVPGCYKT MGMSVMLDVT INYIRSLQNQ IEFLSMKLSA ASMFYDFNSA EMDALDTMKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 1e-48 | bHLH family protein |