PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024993129.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 391aa    MW: 43676.2 Da    PI: 9.8118
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024993129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.80.0016358377323
                     ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                     C+ Cg+ F +++ L++H++++
  XP_024993129.1 358 CSQCGRQF-NPEKLHTHMKSC 377
                     ********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MSLLIILGKV YDFYIAIGSY SGGGGGEVRK VHIIYFLSRK GRIEHPHLIR VHHLSRNGVR  60
LRDVKRWLSE LRGKDMPEGF AWSYKRRYKA GYVWQDLLDE DLITPISDNE YVLKGSEISF  120
ITLSNDLSSY GEKEVSKPKN SHPFKVEIVD SRIPLATKAQ ENLIDLSTKT SFEIEELPSF  180
GSETSTDDTT KHQEDYKFVT ATKHEEMQNQ KKIEINSFLE TFLNKNKNDS KSKKGDNQKG  240
SCSSKASPSS NYSFRKSSSY SGSGASHTFL NLITCGIVDT NESAVTVMNQ RKNGINTMNA  300
SSKKENQEGT NIGQVVKGET LGGSERKEGS KTSYNLGSSN YSIKTFPAAY KFGNGPYCSQ  360
CGRQFNPEKL HTHMKSCRGM KALAKAAKSK S