PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024993112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 388aa MW: 43806.2 Da PI: 6.9242 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.4 | 2e-51 | 5 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yLkkk++++ l++ e ik+vdiyk++PwdLp+ + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_024993112.1 5 MLPGFRFHPTDEELVGFYLKKKIQHRVLPI-ELIKQVDIYKYDPWDLPNLAPTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 98 579***************************.89***************8888999***************************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfy+gra kg ktdW+mhe+rl XP_024993112.1 99 dGTSCIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 132 55566***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence |
MDEVMLPGFR FHPTDEELVG FYLKKKIQHR VLPIELIKQV DIYKYDPWDL PNLAPTGEKE 60 WYFYCPRDRK YRNSARPNRV TGAGFWKATG TDRPIYSSDG TSCIGLKKSL VFYRGRAAKG 120 IKTDWMMHEF RLPSLSQSQS QPSPPKKILD KSLPPNDAWA ICRIFKKTSS MAQRALSHSW 180 VSSLSEHKES ELFTESNQFS LENISCMTDQ LCNNDSRLAS PDSFSALDIP SYTPMNPTAC 240 KLSPFSVPHT GFPTGFMFST VDISGPTTKN TSDVTPMLFN LDPDLLGDAS KTSENMVFGG 300 PQQQFNNFSM KSPQDRQGSI DTGDHDEGLR KNSDPINDNH KWANVRTSGF PFSVPSTVTD 360 DWNLNMPWDS PTCPSEMSTT YSTNKCYT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 1e-100 | NAC family protein |