PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024993004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 228aa    MW: 26017.5 Da    PI: 4.5631
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024993004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.4e-1261106555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     + ++ErrRR++++s++ eLr+l+Pk      + l+K +i + A++YIk+Lq
  XP_024993004.1  61 NLKAERRRREKLKSRMLELRSLVPKI-----TNLNKETIITDAIDYIKELQ 106
                     5689*********************6.....68*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MEFSNLFDLQ IPPPPPPVVE ETHTSFERVI CRNSRRQQYH DDDDQDDDDD TNHEGKFKSK  60
NLKAERRRRE KLKSRMLELR SLVPKITNLN KETIITDAID YIKELQSSVT DLQNEIVEME  120
AEMAHEQPSE IIQVPSEEKM ENWGIESDVE VTRIDENKSW MKIVFGKKAG GFTKLIEAMS  180
VLGVELVDTS VTATKGALLV TSCIKGTQGK MLDSEQVQEV LVEIIKAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16570ERRRRE
26671RRRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.16e-28bHLH family protein