PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024992993.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Dof

Protein Properties

Length: 285aa MW: 31702.4 Da PI: 8.9491

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024992993.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	114.5	4.5e-36	47	105	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++ lkcprC+stntkfCyynny+ +qPr+fCkaC+r+WtkGG+lrnvPvGggr++++++ XP_024992993.1 47 SDPLKCPRCESTNTKFCYYNNYNKTQPRHFCKACKRHWTKGGTLRNVPVGGGRKNKRAK 105 6789***********************************************97776654 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGFSSKQVSG DHLELNWTQT MLGSDTNTQS PNPRSTGIKR PLQTQQSDPL KCPRCESTNT 60 KFCYYNNYNK TQPRHFCKAC KRHWTKGGTL RNVPVGGGRK NKRAKRSNSG VMAAGTAATT 120 TVDHHHGVHS LGLSDQKYLF SDDKGLFFKP IDSDGKGVLE SYTDNIDRVS WDFNGGFTGP 180 TNMPQLPHQS LGFSMLSNLS SIDTNPIPII PTSFSPLLTG FKEDSTTRSM IMPNSSSTAI 240 NVSQPWLQVP STSNFLESNY WNWNDIDSMV QADLNKPFED QQLKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-30	Dof family protein