PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | NAC | ||||||||
Protein Properties | Length: 303aa MW: 34323.6 Da PI: 8.6522 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.6 | 1.5e-33 | 59 | 199 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 lp+G++F+Ptd+e++ e+Lk+kv + + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++ XP_024992937.1 59 LPAGVKFDPTDQEIL-EHLKAKVGCGTnqlH---PliddfipTIEGEtGICYTHPEKLP-GVSNDGQIRHFFHRPSKAYTTGTRKRRKVHmdaer 148 799***********9.99*****99984551...233344333554448**********.566667778******************84444554 PP NAM 80 .sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++vl +g+ g kk+Lv+y gr++k+ekt+Wvmh+y+l XP_024992937.1 149 gETRWHKTGKTRPVLI-SGSIEGFKKILVLYtnYGRQKKPEKTNWVMHQYHL 199 4778************.8999**********6658***************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MTWCNDESSS LQTLSTSNST EKTIFQSRNL KNKFTTSCPS CGHTIQLQAT GLLQDLPGLP 60 AGVKFDPTDQ EILEHLKAKV GCGTNQLHPL IDDFIPTIEG ETGICYTHPE KLPGVSNDGQ 120 IRHFFHRPSK AYTTGTRKRR KVHMDAERGE TRWHKTGKTR PVLISGSIEG FKKILVLYTN 180 YGRQKKPEKT NWVMHQYHLG NNEEEKDGEI VLSKVFYQTQ PRNCASGIKD SSSIDEKTDR 240 NPKIRDTGFV QNYSVDCPNF ISYDIDHRRQ INREIPTRVI PSFALPDDPS SFIRLPTGSN 300 KES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 1e-109 | NAC family protein |