PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992936.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family NAC
Protein Properties Length: 303aa    MW: 34323.6 Da    PI: 8.6522
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992936.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.61.5e-33591991128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..... 79 
                     lp+G++F+Ptd+e++ e+Lk+kv   +   +           +i+   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++     
  XP_024992936.1  59 LPAGVKFDPTDQEIL-EHLKAKVGCGTnqlH---PliddfipTIEGEtGICYTHPEKLP-GVSNDGQIRHFFHRPSKAYTTGTRKRRKVHmdaer 148
                     799***********9.99*****99984551...233344333554448**********.566667778******************84444554 PP

             NAM  80 .sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      + +W++tgk+++vl  +g+  g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_024992936.1 149 gETRWHKTGKTRPVLI-SGSIEGFKKILVLYtnYGRQKKPEKTNWVMHQYHL 199
                     4778************.8999**********6658***************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MTWCNDESSS LQTLSTSNST EKTIFQSRNL KNKFTTSCPS CGHTIQLQAT GLLQDLPGLP  60
AGVKFDPTDQ EILEHLKAKV GCGTNQLHPL IDDFIPTIEG ETGICYTHPE KLPGVSNDGQ  120
IRHFFHRPSK AYTTGTRKRR KVHMDAERGE TRWHKTGKTR PVLISGSIEG FKKILVLYTN  180
YGRQKKPEKT NWVMHQYHLG NNEEEKDGEI VLSKVFYQTQ PRNCASGIKD SSSIDEKTDR  240
NPKIRDTGFV QNYSVDCPNF ISYDIDHRRQ INREIPTRVI PSFALPDDPS SFIRLPTGSN  300
KES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-109NAC family protein