PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024992906.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 412aa    MW: 45064.9 Da    PI: 6.0441
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024992906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.82.5e-053063391755
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++   L++l+ +      +K + a++L +A++YIk+L+
  XP_024992906.1 306 GDRVTALQQLVSPF-----GKTDTASVLHEAIDYIKHLH 339
                     55666677777776.....8*****************95 PP

Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MAEEFQAEVC GGSWWSSPRA TFNQSSYIGN YGGCWQSDLM NMKTWSTEDS SDHDSTTVFQ  60
KSGGCANAIS PDSAFPMMGG ASPPSTTTNW NQALLVNGRT EEAGSYNQTL PEILNNLPSG  120
GQDCAGFAMD QQQTSSFLTN SGDSTGNLVS TSYGYPSSLL QTLFDSTSPP PPPAAAPPQP  180
PLYDFEANLN DFNPVSSMPR FSSLVKPKQQ VLGGLHLANK TPFWNASVLD SNDNRAGFFA  240
STQSRYLSST TYEEKPNCPN LKSQNEEIRD MGSSVKKTTG DPTFKRPRLE TPSPLPTFKV  300
RKEKLGDRVT ALQQLVSPFG KTDTASVLHE AIDYIKHLHD QVNVLSAPYM KNGATIQRQQ  360
IHDHKVKDTT EGAKHHDLRS RGLCLVPVSS TFPVTTETIP DYWSSSFGNT FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.14e-56bHLH family protein