PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_024992720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 333aa MW: 37330.7 Da PI: 8.8627 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.7 | 1.1e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +++ewyfFs+rd+ky++g+r+nra++sgyWkatg+dk++ls+ XP_024992720.1 15 LPPGFRFHPTDEELVVYYLKKKASSIPLPV-AIIAEVDLYKFDPWELPSKATFGDQEWYFFSPRDRKYPNGTRPNRAATSGYWKATGTDKPILSS 108 79****************************.88***************988899***************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_024992720.1 109 rGDQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 67788***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 333 aa Download sequence |
MESTDSSTCS QYPNLPPGFR FHPTDEELVV YYLKKKASSI PLPVAIIAEV DLYKFDPWEL 60 PSKATFGDQE WYFFSPRDRK YPNGTRPNRA ATSGYWKATG TDKPILSSRG DQKVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLVDNASFKS PIVNLANRKG SLRLDEWVLC RIYKKNNGSR 180 PTERDTTDHH DYIENMMAAN SSKATNPSGS LIDHQETSSF FEILNNEDGS RIQQTNDSII 240 SKLASSSSSL KSMVFNPKKR SFPTTHYWNL DSTEKRFNSE DEMNGMMDGS GSFVSLLNPI 300 QQAGIGGFHP NTVLGSIGDS AFGYQLSSGN WNT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-99 | NAC family protein |