PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992692.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 807aa MW: 88320.1 Da PI: 7.9612 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.9 | 3.8e-18 | 361 | 460 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g+ W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_024992692.1 361 FEKVLSASDAGRIGRLVLPKKCAEAYlpPISQPEGYPLVVQDLKGKDWVLQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRLE-PEGK 453 99**************************666678889***************9989999999***9.********************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_024992692.1 454 LVMGFRK 460 7777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 807 aa Download sequence |
MASSSGSTKV CFNSTCKEVL EVPRQGWLCR TGDFADLCDR CSSAFKDGKF CDTYHMNASG 60 WRCCESCGKQ IHCGCIVSFH MFILLDAGGI ECLNCAKTEF ILVKMILPPS EKKCPRFYFS 120 FSQNKSPLPK TPNPTWPSAS HFLQGPAERI RDISSKNWRS ISGSGPVPWR QAPSLFNASK 180 VQPEFQSVLG SIDNPLATEQ LSSCSLGKST ANEPSEKLVN ESWQVGASEM AAARARAIGI 240 QYDGQCNLFG DVPRQSFFYT NELPTSLSSL PARMVAQDQK SEKGKVSGIH VQHLCPLPLV 300 GKQFSNNNGS GPSLEAQAHN AKSRGETRGR NQLLPRYWPR ITDQELQQIS GGTNAKITPL 360 FEKVLSASDA GRIGRLVLPK KCAEAYLPPI SQPEGYPLVV QDLKGKDWVL QFRFWPNNNS 420 RMYVLEGVTP CIQSMQLQAG DTVTFSRLEP EGKLVMGFRK ASLASPSDQG NETVSTRNED 480 PSKGTISFKS RNPDGTWSEV DKISIRAKRK KGAKTGSNCK QLKLNGEEIL QLNVTLEQVQ 540 ELLQPPLINA PTIVVVEGVE FEDYQEAPII GSPAIFSTNH QGSICSMEVK PTPERLQHML 600 PMINHASSRN INSENPEPVK MMDGLDALAD LAIQDGEAIP TLSQATTRHP RHRPGCTCIV 660 CIQSPSATKH KPTCTCNVCL AVKRFTQTPM VLHGSKDSEK EAGNSVRVPS QVPYADILRH 720 TQTGNSGHDH KTAAGGSSEN NPDGEKPSTP FKSQNIDLNT QPEREEESSS PVLESIGITS 780 LAPEPTQRCI RQMKLSINGI TDGNHAL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21550.1 | 1e-119 | B3 family protein |