PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_024992507.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
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Family | B3 | ||||||||
Protein Properties | Length: 475aa MW: 53763.2 Da PI: 6.6622 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.5 | 5.8e-19 | 112 | 212 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt sd++ + l++pk a+++ + ++ +++l+ +d++g W +++ yr + +r+v+t+GW+ Fv +++L +gD ++F + +s XP_024992507.1 112 FSKILTISDTNMHTGLSVPKMLAQNCfpsldlsQ--PQPNQELIAKDLHGHAWHFTHVYRVSTQRHVITGGWNAFVVSKRLVAGDALIFVR--HS 202 8899*******************888****9632..344569************************************************3..46 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 + el ++++r XP_024992507.1 203 NNELGIGIRR 212 7777888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 475 aa Download sequence |
MASFSSHNGI NNELYKELWM ACAGPLVDIP VQGQRLQLED SVSHKLTGQQ ISELDLPHKM 60 LCQVVDSSLK VDSDSDEVFA IIKLHPFQEM VFEGADDNHQ LLQEAKPSFR AFSKILTISD 120 TNMHTGLSVP KMLAQNCFPS LDLSQPQPNQ ELIAKDLHGH AWHFTHVYRV STQRHVITGG 180 WNAFVVSKRL VAGDALIFVR HSNNELGIGI RRYRQQIPSS SSILSRESMH QGVLASVSHA 240 LYTNKEFVIY YNPRYTGVIV EETDISEDWP GSTWRSIKLS NRMSRWQLEP IQDGRSDVSE 300 LDTGSLSSRH KRLRTCDHGL MNHRANANLG DSVNPLHFHA ILSSSTDLID KGKECENPQV 360 LRLFGVNIEL VFPNSSDRVI LQMEGNVLVQ TIDVRSLGGY EALKNELEKI FKIESELHHG 420 GEKWEVVYED GEGDLMLLGD KPWREFCKIV KKMMIRGSDH QVKKMIGLGF KLYLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46530.1 | 2e-94 | ARF family protein |